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genomes: 121224

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
121224 Pediculus humanus Pediculidae Phthiraptera Arthropoda GCA_000006295.1 88 57955 0.1516117361266647 94.5 ["u11", "u12", "u4atac", "u6atac"] PhumU2 ftp://ftp.ensemblgenomes.org/pub/metazoa/release-52/fasta/pediculus_humanus/dna/Pediculus_humanus.PhumU2.dna.toplevel.fa.gz; ftp://ftp.ensemblgenomes.org/pub/metazoa/release-52/gtf/pediculus_humanus/Pediculus_humanus.PhumU2.52.gtf.gz Pediculus humanus;pediculus_humanus;EnsemblMetazoa;121224;PhumU2;GCA_000006295.1;PhumU2.5;N;N;Y;Y;N;Y;pediculus_humanus_core_52_105_2;1 1

Links from other tables

  • 58,043 rows from taxonomy_id in introns
  • 10,785 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 155.287ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)