genomes: 121224
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121224 | Pediculus humanus | Pediculidae | Phthiraptera | Arthropoda | GCA_000006295.1 | 88 | 57955 | 0.1516117361266647 | 94.5 | ["u11", "u12", "u4atac", "u6atac"] | PhumU2 | ftp://ftp.ensemblgenomes.org/pub/metazoa/release-52/fasta/pediculus_humanus/dna/Pediculus_humanus.PhumU2.dna.toplevel.fa.gz; ftp://ftp.ensemblgenomes.org/pub/metazoa/release-52/gtf/pediculus_humanus/Pediculus_humanus.PhumU2.52.gtf.gz | Pediculus humanus;pediculus_humanus;EnsemblMetazoa;121224;PhumU2;GCA_000006295.1;PhumU2.5;N;N;Y;Y;N;Y;pediculus_humanus_core_52_105_2;1 | 1 |
Links from other tables
- 58,043 rows from taxonomy_id in introns
- 10,785 rows from taxonomy_id in transcripts