genomes: 9823
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9823 | Sus scrofa |
Suidae | Artiodactyla | Chordata | GCF_000003025.6 | 637 | 197748 | 0.3210928245583083 | 99.2 | ["u11", "u12", "u4atac", "u6atac"] | Sscrofa11.1 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/025/GCF_000003025.6_Sscrofa11.1 | GCF_000003025.6;PRJNA28993;SAMN02953785;AEMK00000000.2;representative genome;9823;9823;Sus scrofa;breed=Duroc;TJ Tabasco;latest;Chromosome;Major;Full;2017/02/07;Sscrofa11.1;The Swine Genome Sequencing Consortium (SGSC);GCA_000003025.6;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/025/GCF_000003025.6_Sscrofa11.1;;;na | 1 |
Links from other tables
- 198,385 rows from taxonomy_id in introns
- 27,696 rows from taxonomy_id in transcripts