genomes: 90988
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90988 | Pimephales promelas |
Leuciscidae | Cypriniformes | Chordata | GCF_016745375.1 | 751 | 257963 | 0.29028193294526 | 99.2 | ["u11", "u12", "u4atac", "u6atac"] | EPA_FHM_2.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/745/375/GCF_016745375.1_EPA_FHM_2.0 | GCF_016745375.1;PRJNA702526;SAMN12875914;WIOS00000000.1;representative genome;90988;90988;Pimephales promelas;strain=EPAAWBERC;;latest;Scaffold;Major;Full;2021/01/24;EPA_FHM_2.0;US EPA;GCA_016745375.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/745/375/GCF_016745375.1_EPA_FHM_2.0;;;na | 1 |
Links from other tables
- 258,714 rows from taxonomy_id in introns
- 31,166 rows from taxonomy_id in transcripts