genomes: 81985
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81985 | Capsella rubella |
Brassicaceae | Brassicales | Streptophyta | GCF_000375325.1 | 296 | 123696 | 0.2387250790373572 | 100.0 | ["u11", "u12", "u4atac", "u6atac"] | Caprub1_0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/325/GCF_000375325.1_Caprub1_0 | GCF_000375325.1;PRJNA230563;SAMN02981483;ANNY00000000.1;representative genome;81985;81985;Capsella rubella;cultivar=Monte Gargano;;latest;Scaffold;Major;Full;2013/04/23;Caprub1_0;DOE Joint Genome Institute;GCA_000375325.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/325/GCF_000375325.1_Caprub1_0;;;na | 1 |
Links from other tables
- 123,992 rows from taxonomy_id in introns
- 28,182 rows from taxonomy_id in transcripts