genomes: 8128
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8128 | Oreochromis niloticus |
Cichlidae | Cichliformes | Chordata | GCF_001858045.2 | 778 | 283526 | 0.2736507400529011 | 99.6 | ["u11", "u12", "u4atac", "u6atac"] | O_niloticus_UMD_NMBU | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/858/045/GCF_001858045.2_O_niloticus_UMD_NMBU | GCF_001858045.2;PRJNA354796;SAMN05859795;MKQE00000000.2;representative genome;8128;8128;Oreochromis niloticus;;F11D_XX;latest;Chromosome;Major;Full;2018/06/29;O_niloticus_UMD_NMBU;University of Maryland;GCA_001858045.3;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/858/045/GCF_001858045.2_O_niloticus_UMD_NMBU;;;na | 1 |
Links from other tables
- 284,304 rows from taxonomy_id in introns
- 39,231 rows from taxonomy_id in transcripts