genomes: 8032
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8032 | Salmo trutta |
Salmonidae | Salmoniformes | Chordata | GCF_901001165.1 | 1287 | 421629 | 0.3043157506455182 | 99.2 | ["u11", "u12", "u4atac", "u6atac"] | fSalTru1.1 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/901/001/165/GCF_901001165.1_fSalTru1.1 | GCF_901001165.1;PRJNA550988;SAMEA994732;CAAJIE000000000.1;representative genome;8032;8032;Salmo trutta;;;latest;Chromosome;Major;Full;2019/06/02;fSalTru1.1;SC;GCA_901001165.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/901/001/165/GCF_901001165.1_fSalTru1.1;;;na | 1 |
Links from other tables
- 422,916 rows from taxonomy_id in introns
- 51,906 rows from taxonomy_id in transcripts