genomes: 8023
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8023 | Oncorhynchus nerka |
Salmonidae | Salmoniformes | Chordata | GCF_006149115.1 | 1089 | 344611 | 0.3150130170668209 | 90.2 | ["u11", "u12", "u4atac", "u6atac"] | Oner_1.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/149/115/GCF_006149115.1_Oner_1.0 | GCF_006149115.1;PRJNA548514;SAMN11519041;SZNR00000000.1;representative genome;8023;8023;Oncorhynchus nerka;;On170113-E2;latest;Chromosome;Major;Full;2019/06/07;Oner_1.0;Fisheries and Oceans Canada;GCA_006149115.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/149/115/GCF_006149115.1_Oner_1.0;;;na | 1 |
Links from other tables
- 345,700 rows from taxonomy_id in introns
- 44,472 rows from taxonomy_id in transcripts