genomes: 8022
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8022 | Oncorhynchus mykiss |
Salmonidae | Salmoniformes | Chordata | GCF_013265735.2 | 1270 | 416682 | 0.3038626445142026 | 99.6 | ["u11", "u12", "u4atac", "u6atac"] | USDA_OmykA_1.1 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/265/735/GCF_013265735.2_USDA_OmykA_1.1 | GCF_013265735.2;PRJNA639144;SAMN14537335;JAAXML000000000.2;representative genome;8022;8022;Oncorhynchus mykiss;;Arlee;latest;Chromosome;Major;Full;2020/09/23;USDA_OmykA_1.1;USDA/ARS;GCA_013265735.3;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/265/735/GCF_013265735.2_USDA_OmykA_1.1;;;na | 1 |
Links from other tables
- 417,952 rows from taxonomy_id in introns
- 47,873 rows from taxonomy_id in transcripts