genomes: 8018
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8018 | Oncorhynchus keta |
Salmonidae | Salmoniformes | Chordata | GCF_012931545.1 | 1057 | 331648 | 0.3176988623555402 | 89.4 | ["u11", "u12", "u4atac", "u6atac"] | Oket_V1 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/931/545/GCF_012931545.1_Oket_V1 | GCF_012931545.1;PRJNA655759;SAMN12367893;JABAHX000000000.1;representative genome;8018;8018;Oncorhynchus keta;;Oke142-1_Chum_Gynogen;latest;Chromosome;Major;Full;2020/04/29;Oket_V1;Fisheries and Oceans Canada;GCA_012931545.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/931/545/GCF_012931545.1_Oket_V1;;;na | 1 |
Links from other tables
- 332,705 rows from taxonomy_id in introns
- 44,116 rows from taxonomy_id in transcripts