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genomes: 8018

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
8018

Oncorhynchus keta

Salmonidae Salmoniformes Chordata GCF_012931545.1 1057 331648 0.3176988623555402 89.4 ["u11", "u12", "u4atac", "u6atac"] Oket_V1 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/931/545/GCF_012931545.1_Oket_V1 GCF_012931545.1;PRJNA655759;SAMN12367893;JABAHX000000000.1;representative genome;8018;8018;Oncorhynchus keta;;Oke142-1_Chum_Gynogen;latest;Chromosome;Major;Full;2020/04/29;Oket_V1;Fisheries and Oceans Canada;GCA_012931545.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/931/545/GCF_012931545.1_Oket_V1;;;na 1

Links from other tables

  • 332,705 rows from taxonomy_id in introns
  • 44,116 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.519ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)