genomes: 7998
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7998 | Ictalurus punctatus |
Ictaluridae | Siluriformes | Chordata | GCF_001660625.1 | 708 | 230664 | 0.3060007261034179 | 98.4 | ["u11", "u12", "u4atac", "u6atac"] | IpCoco_1.2 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/660/625/GCF_001660625.1_IpCoco_1.2 | GCF_001660625.1;PRJNA327588;SAMN03486842;LBML00000000.1;representative genome;7998;7998;Ictalurus punctatus;breed=USDA103;;latest;Chromosome;Major;Full;2016/06/21;IpCoco_1.2;Auburn University;GCA_001660625.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/660/625/GCF_001660625.1_IpCoco_1.2;;;na | 1 |
Links from other tables
- 231,372 rows from taxonomy_id in introns
- 27,100 rows from taxonomy_id in transcripts