genomes: 7950
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7950 | Clupea harengus |
Clupeidae | Clupeiformes | Chordata | GCF_900700415.2 | 799 | 249116 | 0.3197087009583258 | 94.1 | ["u11", "u12", "u4atac", "u6atac"] | Ch_v2.0.2 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/700/415/GCF_900700415.2_Ch_v2.0.2 | GCF_900700415.2;PRJNA587748;SAMEA5339254;CAADHV000000000.1;representative genome;7950;7950;Clupea harengus;;;latest;Chromosome;Major;Full;2019/04/16;Ch_v2.0.2;UPPSALA UNIVERISTY;GCA_900700415.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/700/415/GCF_900700415.2_Ch_v2.0.2;;;na | 1 |
Links from other tables
- 249,915 rows from taxonomy_id in introns
- 29,776 rows from taxonomy_id in transcripts