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genomes: 7950

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
7950

Clupea harengus

Clupeidae Clupeiformes Chordata GCF_900700415.2 799 249116 0.3197087009583258 94.1 ["u11", "u12", "u4atac", "u6atac"] Ch_v2.0.2 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/700/415/GCF_900700415.2_Ch_v2.0.2 GCF_900700415.2;PRJNA587748;SAMEA5339254;CAADHV000000000.1;representative genome;7950;7950;Clupea harengus;;;latest;Chromosome;Major;Full;2019/04/16;Ch_v2.0.2;UPPSALA UNIVERISTY;GCA_900700415.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/700/415/GCF_900700415.2_Ch_v2.0.2;;;na 1

Links from other tables

  • 249,915 rows from taxonomy_id in introns
  • 29,776 rows from taxonomy_id in transcripts
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