genomes: 74940
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74940 | Oncorhynchus tshawytscha |
Salmonidae | Salmoniformes | Chordata | GCF_018296145.1 | 1210 | 397757 | 0.3032832289387343 | 99.6 | ["u11", "u12", "u4atac", "u6atac"] | Otsh_v2.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/018/296/145/GCF_018296145.1_Otsh_v2.0 | GCF_018296145.1;PRJNA432585;SAMN17219827;JAEPEU000000000.1;representative genome;74940;74940;Oncorhynchus tshawytscha;;Ot180627B;latest;Chromosome;Major;Full;2021/05/07;Otsh_v2.0;Fisheries and Oceans Canada;GCA_018296145.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/018/296/145/GCF_018296145.1_Otsh_v2.0;;;na | 1 |
Links from other tables
- 398,967 rows from taxonomy_id in introns
- 45,952 rows from taxonomy_id in transcripts