genomes: 6565
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6565 | Crassostrea virginica |
Ostreidae | Ostreida | Mollusca | GCF_002022765.2 | 695 | 278262 | 0.2491423409342658 | 97.6 | ["u11", "u12", "u4atac", "u6atac"] | C_virginica-3.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/022/765/GCF_002022765.2_C_virginica-3.0 | GCF_002022765.2;PRJNA379157;SAMN06349363;MWPT00000000.3;representative genome;6565;6565;Crassostrea virginica;;RU13XGHG1-28;latest;Chromosome;Major;Full;2017/09/01;C_virginica-3.0;McDonnell Genome Institute - Washington University School of Medicine;GCA_002022765.4;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/022/765/GCF_002022765.2_C_virginica-3.0;;;na | 1 |
Links from other tables
- 278,957 rows from taxonomy_id in introns
- 39,023 rows from taxonomy_id in transcripts