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genomes: 59689

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
59689

Arabidopsis lyrata

Brassicaceae Brassicales Streptophyta GCF_000004255.2 314 135715 0.2308331311705592 99.6 ["u11", "u12", "u4atac", "u6atac"] v.1.0 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/255/GCF_000004255.2_v.1.0 GCF_000004255.2;PRJNA49545;SAMN02981250;ADBK00000000.1;representative genome;81972;59689;Arabidopsis lyrata subsp. lyrata;;;latest;Scaffold;Minor;Full;2016/11/26;v.1.0;US DOE Joint Genome Institute (JGI-PGF);GCA_000004255.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/255/GCF_000004255.2_v.1.0;;;na 1

Links from other tables

  • 136,029 rows from taxonomy_id in introns
  • 33,483 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.231ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)