genomes: 52670
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52670 | Austrofundulus limnaeus |
Rivulidae | Cyprinodontiformes | Chordata | GCF_001266775.1 | 648 | 201818 | 0.3200537374176405 | 85.5 | ["u11", "u12", "u4atac", "u6atac"] | Austrofundulus_limnaeus-1.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/266/775/GCF_001266775.1_Austrofundulus_limnaeus-1.0 | GCF_001266775.1;PRJNA294420;SAMN03490872;LDAR00000000.1;representative genome;52670;52670;Austrofundulus limnaeus;strain=Quisiro;;latest;Scaffold;Major;Full;2015/07/28;Austrofundulus_limnaeus-1.0;Center for Life in Extreme Environments at Portland State University, Portland, OR;GCA_001266775.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/266/775/GCF_001266775.1_Austrofundulus_limnaeus-1.0;;;na | 1 |
Links from other tables
- 202,466 rows from taxonomy_id in introns
- 26,300 rows from taxonomy_id in transcripts