genomes: 51239
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51239 | Vanilla planifolia |
Orchidaceae | Asparagales | Streptophyta | GCA_016413895.1 | 165 | 111009 | 0.148415996545955 | 83.9 | ["u11", "u12", "u6atac"] | Elo_Vpla-A_principal_1.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/413/895/GCA_016413895.1_Elo_Vpla-A_principal_1.0 | GCA_016413895.1;PRJNA633886;SAMN14973820;JADCNL000000000.1;representative genome;51239;51239;Vanilla planifolia;cultivar=Daphna;;latest;Chromosome;Major;Full;2020/12/28;Elo_Vpla-A_principal_1.0;Elo Life Systems;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/413/895/GCA_016413895.1_Elo_Vpla-A_principal_1.0;;;na | 1 |
Links from other tables
- 111,174 rows from taxonomy_id in introns
- 29,167 rows from taxonomy_id in transcripts