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genomes: 43179

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
43179

Ictidomys tridecemlineatus

Sciuridae Rodentia Chordata GCF_016881025.1 636 195270 0.3246454932467612 96.1 ["u11", "u12", "u4atac", "u6atac"] HiC_Itri_2 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/881/025/GCF_016881025.1_HiC_Itri_2 GCF_016881025.1;PRJNA714113;SAMN08111062;JAESOR000000000.1;representative genome;43179;43179;Ictidomys tridecemlineatus;;GS200;latest;Chromosome;Major;Full;2021/02/17;HiC_Itri_2;Stanford University School of Medicine;GCA_016881025.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/881/025/GCF_016881025.1_HiC_Itri_2;;;na 1

Links from other tables

  • 195,906 rows from taxonomy_id in introns
  • 29,549 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.528ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)