genomes: 43179
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43179 | Ictidomys tridecemlineatus |
Sciuridae | Rodentia | Chordata | GCF_016881025.1 | 636 | 195270 | 0.3246454932467612 | 96.1 | ["u11", "u12", "u4atac", "u6atac"] | HiC_Itri_2 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/881/025/GCF_016881025.1_HiC_Itri_2 | GCF_016881025.1;PRJNA714113;SAMN08111062;JAESOR000000000.1;representative genome;43179;43179;Ictidomys tridecemlineatus;;GS200;latest;Chromosome;Major;Full;2021/02/17;HiC_Itri_2;Stanford University School of Medicine;GCA_016881025.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/881/025/GCF_016881025.1_HiC_Itri_2;;;na | 1 |
Links from other tables
- 195,906 rows from taxonomy_id in introns
- 29,549 rows from taxonomy_id in transcripts