genomes: 4236
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4236 | Lactuca sativa |
Asteraceae | Asterales | Streptophyta | GCF_002870075.2 | 361 | 164007 | 0.2196291248904896 | 99.2 | ["u11", "u12", "u6atac"] | Lsat_Salinas_v7 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/870/075/GCF_002870075.2_Lsat_Salinas_v7 | GCF_002870075.2;PRJNA432228;SAMN01730979;NBSK00000000.1;representative genome;4236;4236;Lactuca sativa;cultivar=Salinas;;latest;Chromosome;Major;Full;2020/04/13;Lsat_Salinas_v7;Lettuce Genome Sequencing Consortium;GCA_002870075.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/870/075/GCF_002870075.2_Lsat_Salinas_v7;;;na | 1 |
Links from other tables
- 164,368 rows from taxonomy_id in introns
- 44,004 rows from taxonomy_id in transcripts