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genomes: 4236

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
4236

Lactuca sativa

Asteraceae Asterales Streptophyta GCF_002870075.2 361 164007 0.2196291248904896 99.2 ["u11", "u12", "u6atac"] Lsat_Salinas_v7 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/870/075/GCF_002870075.2_Lsat_Salinas_v7 GCF_002870075.2;PRJNA432228;SAMN01730979;NBSK00000000.1;representative genome;4236;4236;Lactuca sativa;cultivar=Salinas;;latest;Chromosome;Major;Full;2020/04/13;Lsat_Salinas_v7;Lettuce Genome Sequencing Consortium;GCA_002870075.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/870/075/GCF_002870075.2_Lsat_Salinas_v7;;;na 1

Links from other tables

  • 164,368 rows from taxonomy_id in introns
  • 44,004 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 2.535ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)