genomes: 4170
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4170 | Striga asiatica |
Orobanchaceae | Lamiales | Streptophyta | GCA_008636005.1 | 156 | 151768 | 0.1026829204075722 | 94.1 | ["u11", "u12", "u4atac", "u6atac"] | SGA_v2.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/636/005/GCA_008636005.1_SGA_v2.0 | GCA_008636005.1;PRJDB4996;SAMD00056127;BKCP00000000.1;representative genome;4170;4170;Striga asiatica;strain=UVA1;;latest;Scaffold;Major;Full;2019/09/20;SGA_v2.0;Graduate School of Biological Science, Nara Institute of Science and Technology;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/636/005/GCA_008636005.1_SGA_v2.0;;;na | 1 |
Links from other tables
- 151,924 rows from taxonomy_id in introns
- 34,379 rows from taxonomy_id in transcripts