genomes: 4113
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4113 | Solanum tuberosum |
Solanaceae | Solanales | Streptophyta | GCF_000226075.1 | 307 | 133799 | 0.2289233889609711 | 98.4 | ["u11", "u12", "u6atac"] | SolTub_3.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/075/GCF_000226075.1_SolTub_3.0 | GCF_000226075.1;PRJNA225997;SAMN02981305;AEWC00000000.1;representative genome;4113;4113;Solanum tuberosum;cultivar=DM 1-3 516 R44;;latest;Scaffold;Major;Full;2011/09/19;SolTub_3.0;Potato Genome Sequencing Consortium;GCA_000226075.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/075/GCF_000226075.1_SolTub_3.0;;;na | 1 |
Links from other tables
- 134,106 rows from taxonomy_id in introns
- 32,258 rows from taxonomy_id in transcripts