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genomes: 3900

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
3900

Trifolium subterraneum

Fabaceae Fabales Streptophyta GCA_001742945.1 142 133137 0.1065434164422002 85.1 ["u11", "u12", "u6atac"] TSUd_r1.1 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/945/GCA_001742945.1_TSUd_r1.1 GCA_001742945.1;PRJDB2012;SAMD00004201;BCLP00000000.1;representative genome;3900;3900;Trifolium subterraneum;cultivar=Daliak;;latest;Scaffold;Major;Full;2016/07/20;TSUd_r1.1;Lab. of Plant Genome Informatics, Department of Plant Genome Research, Kazusa DNA Research Institute;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/945/GCA_001742945.1_TSUd_r1.1;;;na 1

Links from other tables

  • 133,279 rows from taxonomy_id in introns
  • 41,942 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 2.445ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)