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genomes: 3726

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
3726

Raphanus sativus

Brassicaceae Brassicales Streptophyta GCF_000801105.1 487 226316 0.2147237911315106 99.2 ["u11", "u12", "u4atac", "u6atac"] Rs1.0 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/801/105/GCF_000801105.1_Rs1.0 GCF_000801105.1;PRJNA344915;SAMN03084390;JRUI00000000.2;representative genome;3726;3726;Raphanus sativus;cultivar=WK10039;;latest;Scaffold;Major;Full;2015/09/29;Rs1.0;Dr. Namshin Kim at KRIBB;GCA_000801105.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/801/105/GCF_000801105.1_Rs1.0;;;na 1

Links from other tables

  • 226,803 rows from taxonomy_id in introns
  • 56,824 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.963ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)