genomes: 3726
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3726 | Raphanus sativus |
Brassicaceae | Brassicales | Streptophyta | GCF_000801105.1 | 487 | 226316 | 0.2147237911315106 | 99.2 | ["u11", "u12", "u4atac", "u6atac"] | Rs1.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/801/105/GCF_000801105.1_Rs1.0 | GCF_000801105.1;PRJNA344915;SAMN03084390;JRUI00000000.2;representative genome;3726;3726;Raphanus sativus;cultivar=WK10039;;latest;Scaffold;Major;Full;2015/09/29;Rs1.0;Dr. Namshin Kim at KRIBB;GCA_000801105.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/801/105/GCF_000801105.1_Rs1.0;;;na | 1 |
Links from other tables
- 226,803 rows from taxonomy_id in introns
- 56,824 rows from taxonomy_id in transcripts