genomes: 3711
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3711 | Brassica rapa |
Brassicaceae | Brassicales | Streptophyta | GCF_000309985.2 | 389 | 189228 | 0.2051503820859944 | 100.0 | ["u11", "u12", "u6atac"] | CAAS_Brap_v3.01 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/985/GCF_000309985.2_CAAS_Brap_v3.01 | GCF_000309985.2;PRJNA249065;SAMN02981293;AENI00000000.3;representative genome;3711;3711;Brassica rapa;cultivar=Chiifu-401-42;;latest;Chromosome;Major;Full;2020/01/23;CAAS_Brap_v3.01;Brassica rapa genome sequencing project, BraGSP;GCA_000309985.3;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/985/GCF_000309985.2_CAAS_Brap_v3.01;;;na | 1 |
Links from other tables
- 189,617 rows from taxonomy_id in introns
- 47,442 rows from taxonomy_id in transcripts