genomes: 3702
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3702 | Arabidopsis thaliana |
Brassicaceae | Brassicales | Streptophyta | GCF_000001735.4 | 276 | 123586 | 0.2228286318644943 | 99.6 | ["u11", "u12", "u4atac", "u6atac"] | TAIR10.1 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/735/GCF_000001735.4_TAIR10.1 | GCF_000001735.4;PRJNA116;SAMN03081427;;reference genome;3702;3702;Arabidopsis thaliana;ecotype=Columbia;;latest;Chromosome;Minor;Full;2018/03/15;TAIR10.1;The Arabidopsis Information Resource (TAIR);GCA_000001735.2;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/735/GCF_000001735.4_TAIR10.1;;;na | 1 |
Links from other tables
- 123,862 rows from taxonomy_id in introns
- 29,783 rows from taxonomy_id in transcripts