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genomes: 35658

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
35658

Mastomys coucha

Muridae Rodentia Chordata GCF_008632895.1 652 198375 0.3275937435624312 98.4 ["u11", "u12", "u4atac", "u6atac"] UCSF_Mcou_1 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/632/895/GCF_008632895.1_UCSF_Mcou_1 GCF_008632895.1;PRJNA578167;SAMN07635206;VSBT00000000.1;representative genome;35658;35658;Mastomys coucha;;ucsf_1;latest;Chromosome;Major;Full;2019/09/24;UCSF_Mcou_1;University of California, San Francisco;GCA_008632895.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/632/895/GCF_008632895.1_UCSF_Mcou_1;;;na 1

Links from other tables

  • 199,027 rows from taxonomy_id in introns
  • 29,845 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.557ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)