genomes: 35019
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35019 | Thamnophis sirtalis |
Colubridae | Squamata | Chordata | GCF_001077635.1 | 434 | 128692 | 0.3361058191224075 | 65.1 | ["u11", "u12", "u4atac", "u6atac"] | Thamnophis_sirtalis-6.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/077/635/GCF_001077635.1_Thamnophis_sirtalis-6.0 | GCF_001077635.1;PRJNA294278;SAMN03759628;LFLD00000000.1;representative genome;35019;35019;Thamnophis sirtalis;;EDBJR-23777;latest;Scaffold;Major;Full;2015/06/26;Thamnophis_sirtalis-6.0;The Genome Institute at Washington University School of Medicine (WUGSC);GCA_001077635.2;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/077/635/GCF_001077635.1_Thamnophis_sirtalis-6.0;;;na | 1 |
Links from other tables
- 129,126 rows from taxonomy_id in introns
- 19,878 rows from taxonomy_id in transcripts