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genomes: 35019

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
35019

Thamnophis sirtalis

Colubridae Squamata Chordata GCF_001077635.1 434 128692 0.3361058191224075 65.1 ["u11", "u12", "u4atac", "u6atac"] Thamnophis_sirtalis-6.0 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/077/635/GCF_001077635.1_Thamnophis_sirtalis-6.0 GCF_001077635.1;PRJNA294278;SAMN03759628;LFLD00000000.1;representative genome;35019;35019;Thamnophis sirtalis;;EDBJR-23777;latest;Scaffold;Major;Full;2015/06/26;Thamnophis_sirtalis-6.0;The Genome Institute at Washington University School of Medicine (WUGSC);GCA_001077635.2;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/077/635/GCF_001077635.1_Thamnophis_sirtalis-6.0;;;na 1

Links from other tables

  • 129,126 rows from taxonomy_id in introns
  • 19,878 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.378ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)