genomes: 34294
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34294 | Cucurbita argyrosperma |
Cucurbitaceae | Cucurbitales | Streptophyta | GCA_018691285.1 | 306 | 147391 | 0.2071809176895942 | 98.4 | ["u11", "u12", "u6atac"] | UNAM_Csor_1.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/691/285/GCA_018691285.1_UNAM_Csor_1.0 | GCA_018691285.1;PRJNA485527;SAMN16575649;JAGKQH000000000.1;representative genome;37648;34294;Cucurbita argyrosperma subsp. sororia;;JBR-2021;latest;Chromosome;Major;Full;2021/06/03;UNAM_Csor_1.0;Instituto de Ecologia, UNAM;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/691/285/GCA_018691285.1_UNAM_Csor_1.0;;;na | 1 |
Links from other tables
- 147,697 rows from taxonomy_id in introns
- 30,365 rows from taxonomy_id in transcripts