genomes: 29710
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29710 | Dioscorea cayenensis |
Dioscoreaceae | Dioscoreales | Streptophyta | GCF_009730915.1 | 302 | 127341 | 0.2365973848938053 | 97.6 | ["u11", "u12", "u6atac"] | TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/730/915/GCF_009730915.1_TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22_25.fasta | GCF_009730915.1;PRJNA695139;SAMD00039982;BLBR00000000.1;representative genome;55577;29710;Dioscorea cayenensis subsp. rotundata;cultivar=TDr96_F1;;latest;Chromosome;Major;Full;2019/11/25;TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta;Genetics and Breeding, Iwate Biotechnology Research Center;GCA_009730915.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/730/915/GCF_009730915.1_TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22_25.fasta;;;na | 1 |
Links from other tables
- 127,643 rows from taxonomy_id in introns
- 28,827 rows from taxonomy_id in transcripts