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genomes: 28743

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
28743

Cyprinodon variegatus

Cyprinodontidae Cyprinodontiformes Chordata GCF_000732505.1 695 218652 0.3168495580062641 99.2 ["u11", "u12", "u4atac", "u6atac"] C_variegatus-1.0 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/732/505/GCF_000732505.1_C_variegatus-1.0 GCF_000732505.1;PRJNA308224;SAMN02736898;JPKM00000000.1;representative genome;28743;28743;Cyprinodon variegatus;;N-32;latest;Scaffold;Major;Full;2015/10/01;C_variegatus-1.0;Aquatic Genome Models;GCA_000732505.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/732/505/GCF_000732505.1_C_variegatus-1.0;;;na 1

Links from other tables

  • 219,347 rows from taxonomy_id in introns
  • 24,573 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 2.559ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)