genomes: 278164
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 278164 | Alosa alosa |
Clupeidae | Clupeiformes | Chordata | GCA_017589495.1 | 560 | 230564 | 0.2422941797476679 | 90.6 | ["u11", "u12", "u4atac", "u6atac"] | AALO_Geno_1.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/589/495/GCA_017589495.1_AALO_Geno_1.0 | GCA_017589495.1;PRJNA668689;SAMN16418510;JADWDJ000000000.1;representative genome;278164;278164;Alosa alosa;ecotype=Scorff River;M-15738;latest;Chromosome;Major;Full;2021/03/30;AALO_Geno_1.0;GenoFish;na;na;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/589/495/GCA_017589495.1_AALO_Geno_1.0;;;na | 1 |
Links from other tables
- 231,124 rows from taxonomy_id in introns
- 26,446 rows from taxonomy_id in transcripts