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genomes: 179676

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
179676

Culicoides sonorensis

Ceratopogonidae Diptera Arthropoda 179676:Cson1 8 59574 0.013426873888087 86.7 ["u11", "u12", "u4atac", "u6atac"] Cson1 ftp://ftp.ensemblgenomes.org/pub/metazoa/release-51/fasta/culicoides_sonorensis/dna/Culicoides_sonorensis.Cson1.dna.toplevel.fa.gz; ftp://ftp.ensemblgenomes.org/pub/metazoa/release-51/gtf/culicoides_sonorensis/Culicoides_sonorensis.Cson1.51.gtf.gz Culicoides sonorensis;culicoides_sonorensis;EnsemblMetazoa;179676;Cson1;;Cson1.2;N;N;N;Y;N;N;culicoides_sonorensis_core_51_104_1;1 1

Links from other tables

  • 59,582 rows from taxonomy_id in introns
  • 15,615 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.354ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)