genomes: 106582
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106582 | Maylandia zebra |
Cichlidae | Cichliformes | Chordata | GCF_000238955.4 | 783 | 257474 | 0.3031863608730838 | 99.6 | ["u11", "u12", "u4atac", "u6atac"] | M_zebra_UMD2a | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/955/GCF_000238955.4_M_zebra_UMD2a | GCF_000238955.4;PRJNA198780;SAMN03892560;AGTA00000000.5;representative genome;106582;106582;Maylandia zebra;ecotype=Mazinzi reef;#2_Kocher and #3_Kocher;latest;Chromosome;Major;Full;2018/04/10;M_zebra_UMD2a;Broad Institute;GCA_000238955.5;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/955/GCF_000238955.4_M_zebra_UMD2a;;;na | 1 |
Links from other tables
- 258,257 rows from taxonomy_id in introns
- 29,971 rows from taxonomy_id in transcripts