genomes: 10141
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10141 | Cavia porcellus |
Caviidae | Rodentia | Chordata | GCF_000151735.1 | 641 | 189589 | 0.3369605214740052 | 98.4 | ["u11", "u12", "u4atac", "u6atac"] | Cavpor3.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/735/GCF_000151735.1_Cavpor3.0 | GCF_000151735.1;PRJNA73553;SAMN02981223;AAKN00000000.2;representative genome;10141;10141;Cavia porcellus;strain=inbred line 2N;;latest;Scaffold;Major;Full;2008/03/03;Cavpor3.0;The Genome Sequencing Platform, The Genome Assembly Team;GCA_000151735.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/735/GCF_000151735.1_Cavpor3.0;;;na | 1 |
Links from other tables
- 190,230 rows from taxonomy_id in introns
- 25,730 rows from taxonomy_id in transcripts