genomes: 10117
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10117 | Rattus rattus |
Muridae | Rodentia | Chordata | GCF_011064425.1 | 615 | 181780 | 0.3371802955124866 | 96.9 | ["u11", "u12", "u4atac", "u6atac"] | Rrattus_CSIRO_v1 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/064/425/GCF_011064425.1_Rrattus_CSIRO_v1 | GCF_011064425.1;PRJNA612505;SAMN12855339;JAAIVD000000000.1;representative genome;10117;10117;Rattus rattus;;New Zealand;latest;Chromosome;Major;Full;2020/03/04;Rrattus_CSIRO_v1;CSIRO;GCA_011064425.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/064/425/GCF_011064425.1_Rrattus_CSIRO_v1;;;na | 1 |
Links from other tables
- 182,395 rows from taxonomy_id in introns
- 25,492 rows from taxonomy_id in transcripts