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genomes: 10090

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
10090

Mus musculus

Muridae Rodentia Chordata GCF_000001635.27 662 221305 0.2982425315474822 99.6 ["u11", "u12", "u4atac", "u6atac"] GRCm39 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/635/GCF_000001635.27_GRCm39 GCF_000001635.27;PRJNA169;;;reference genome;10090;10090;Mus musculus;;;latest;Chromosome;Major;Full;2020/06/24;GRCm39;Genome Reference Consortium;GCA_000001635.9;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/635/GCF_000001635.27_GRCm39;;;na 1

Links from other tables

  • 221,967 rows from taxonomy_id in introns
  • 37,709 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.27ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)