genomes: 10090
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10090 | Mus musculus |
Muridae | Rodentia | Chordata | GCF_000001635.27 | 662 | 221305 | 0.2982425315474822 | 99.6 | ["u11", "u12", "u4atac", "u6atac"] | GRCm39 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/635/GCF_000001635.27_GRCm39 | GCF_000001635.27;PRJNA169;;;reference genome;10090;10090;Mus musculus;;;latest;Chromosome;Major;Full;2020/06/24;GRCm39;Genome Reference Consortium;GCA_000001635.9;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/635/GCF_000001635.27_GRCm39;;;na | 1 |
Links from other tables
- 221,967 rows from taxonomy_id in introns
- 37,709 rows from taxonomy_id in transcripts