genomes: 10042
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10042 | Peromyscus maniculatus |
Cricetidae | Rodentia | Chordata | GCF_003704035.1 | 654 | 206235 | 0.3161115380711396 | 97.6 | ["u11", "u12", "u4atac", "u6atac"] | HU_Pman_2.1.3 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/704/035/GCF_003704035.1_HU_Pman_2.1.3 | GCF_003704035.1;PRJNA738144;SAMN10150431;RCWR00000000.1;representative genome;230844;10042;Peromyscus maniculatus bairdii;;BW;latest;Chromosome;Major;Full;2020/09/17;HU_Pman_2.1.3;Harvard University / Howard Hughes Medical Institute;GCA_003704035.3;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/704/035/GCF_003704035.1_HU_Pman_2.1.3;;;na | 1 |
Links from other tables
- 206,889 rows from taxonomy_id in introns
- 32,108 rows from taxonomy_id in transcripts