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genomes: 39758

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
39758 Mayetiola destructor Cecidomyiidae Diptera Arthropoda GCA_000149185.1 12 69098 0.0173636232093763 92.9 ["u11", "u12", "u4atac", "u6atac"] Mdes_1.0 ftp://ftp.ensemblgenomes.org/pub/metazoa/release-51/fasta/mayetiola_destructor/dna/Mayetiola_destructor.Mdes_1.0.dna.toplevel.fa.gz; ftp://ftp.ensemblgenomes.org/pub/metazoa/release-51/gtf/mayetiola_destructor/Mayetiola_destructor.Mdes_1.0.51.gtf.gz Mayetiola destructor;mayetiola_destructor;EnsemblMetazoa;39758;Mdes_1.0;GCA_000149185.1;OGS1.0;N;N;N;Y;N;Y;mayetiola_destructor_core_51_104_1;1 1

Links from other tables

  • 69,110 rows from taxonomy_id in introns
  • 19,927 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 1.683ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)