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genomes: 9785

Data license: ODbL · Data source: Larue & Roy, 2023

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
9785 Loxodonta africana Elephantidae Proboscidea Chordata GCF_000001905.1 604 176726 0.3406079061636496 97.6 ["u11", "u12", "u4atac", "u6atac"] Loxafr3.0 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/905/GCF_000001905.1_Loxafr3.0 GCF_000001905.1;PRJNA70973;SAMN02953622;AAGU00000000.3;representative genome;9785;9785;Loxodonta africana;;ISIS603380;latest;Scaffold;Major;Full;2009/07/15;Loxafr3.0;Broad Institute;GCA_000001905.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/905/GCF_000001905.1_Loxafr3.0;;;na 1

Links from other tables

  • 177,330 rows from taxonomy_id in introns
  • 21,309 rows from taxonomy_id in transcripts
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