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genomes: 9365

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
9365 Erinaceus europaeus Erinaceidae Eulipotyphla Chordata GCF_000296755.1 583 172889 0.3360772920125438 96.1 ["u11", "u12", "u4atac", "u6atac"] EriEur2.0 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/755/GCF_000296755.1_EriEur2.0 GCF_000296755.1;PRJNA232766;SAMN00760989;AMDU00000000.1;representative genome;9365;9365;Erinaceus europaeus;;Erinaceus europaeus_13Jul2011;latest;Scaffold;Major;Full;2012/09/19;EriEur2.0;Broad Institute;GCA_000296755.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/755/GCF_000296755.1_EriEur2.0;;;na 1

Links from other tables

  • 173,472 rows from taxonomy_id in introns
  • 19,414 rows from taxonomy_id in transcripts
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