genomes: 8364
Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8364 | Xenopus tropicalis | Pipidae | Anura | Chordata | GCF_000004195.4 | 671 | 205061 | 0.3261524702039546 | 99.6 | ["u11", "u12", "u4atac", "u6atac"] | UCB_Xtro_10.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/195/GCF_000004195.4_UCB_Xtro_10.0 | GCF_000004195.4;PRJNA205740;SAMN13041969;AAMC00000000.4;representative genome;8364;8364;Xenopus tropicalis;strain=Nigerian;;latest;Chromosome;Major;Full;2019/11/14;UCB_Xtro_10.0;University of California, Berkeley;GCA_000004195.4;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/195/GCF_000004195.4_UCB_Xtro_10.0;;;na | 1 |
Links from other tables
- 205,732 rows from taxonomy_id in introns
- 21,904 rows from taxonomy_id in transcripts