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genomes: 8364

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
8364 Xenopus tropicalis Pipidae Anura Chordata GCF_000004195.4 671 205061 0.3261524702039546 99.6 ["u11", "u12", "u4atac", "u6atac"] UCB_Xtro_10.0 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/195/GCF_000004195.4_UCB_Xtro_10.0 GCF_000004195.4;PRJNA205740;SAMN13041969;AAMC00000000.4;representative genome;8364;8364;Xenopus tropicalis;strain=Nigerian;;latest;Chromosome;Major;Full;2019/11/14;UCB_Xtro_10.0;University of California, Berkeley;GCA_000004195.4;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/195/GCF_000004195.4_UCB_Xtro_10.0;;;na 1

Links from other tables

  • 205,732 rows from taxonomy_id in introns
  • 21,904 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 5.305ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)