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genomes: 8355

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
8355 Xenopus laevis Pipidae Anura Chordata GCF_017654675.1 1068 329026 0.3235442025604828 100.0 ["u11", "u12", "u4atac", "u6atac"] Xenopus_laevis_v10.1 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/017/654/675/GCF_017654675.1_Xenopus_laevis_v10.1 GCF_017654675.1;PRJNA338693;SAMN18035302;JAGEVR000000000.1;representative genome;8355;8355;Xenopus laevis;strain=J_2021;;latest;Chromosome;Major;Full;2021/04/12;Xenopus_laevis_v10.1;International Xenopus Sequencing Consortium;GCA_017654675.1;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/017/654/675/GCF_017654675.1_Xenopus_laevis_v10.1;;;na 1

Links from other tables

  • 330,094 rows from taxonomy_id in introns
  • 34,695 rows from taxonomy_id in transcripts
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