home / WtMTA / genomes

genomes: 7739

Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
7739 Branchiostoma floridae Branchiostomidae Amphioxiformes Chordata GCF_000003815.2 548 214045 0.2553671368590774 95.7 ["u11", "u12", "u4atac", "u6atac"] Bfl_VNyyK https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/815/GCF_000003815.2_Bfl_VNyyK GCF_000003815.2;PRJNA33245;SAMN02953694;ABEP00000000.3;representative genome;7739;7739;Branchiostoma floridae;strain=S238N-H82;;latest;Chromosome;Major;Full;2020/04/29;Bfl_VNyyK;DOE Joint Genome Institute;GCA_000003815.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/815/GCF_000003815.2_Bfl_VNyyK;;;na 1

Links from other tables

  • 214,593 rows from taxonomy_id in introns
  • 26,689 rows from taxonomy_id in transcripts
Powered by Datasette · Queries took 3.82ms · Data license: ODbL · Data source: Larue & Roy, 2023 · About: Minor Intron Database (WtMTA)