genomes: 5755
Data license: ODbL · Data source: Larue & Roy, 2023
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5755 | Acanthamoeba castellanii | Acanthamoebidae | Longamoebia | Discosea | GCF_000313135.1 | 12 | 88700 | 0.0135269185679502 | 77.6 | ["u11", "u12", "u6atac"] | Acastellanii.strNEFF v1 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/135/GCF_000313135.1_Acastellanii.strNEFF_v1 | GCF_000313135.1;PRJNA193615;SAMN02953809;AHJI00000000.1;representative genome;1257118;5755;Acanthamoeba castellanii str. Neff;strain=Neff;;latest;Scaffold;Major;Full;2013/01/09;Acastellanii.strNEFF v1;JCVI;GCA_000313135.1;identical;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/135/GCF_000313135.1_Acastellanii.strNEFF_v1;;;na | 1 |
Links from other tables
- 88,712 rows from taxonomy_id in introns
- 14,968 rows from taxonomy_id in transcripts