genomes: 4081
Data license: ODbL · Data source: Larue & Roy, 2023
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4081 | Solanum lycopersicum | Solanaceae | Solanales | Streptophyta | GCF_000188115.4 | 315 | 126053 | 0.2492719675867308 | 99.2 | ["u11", "u12", "u6atac"] | SL3.0 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/115/GCF_000188115.4_SL3.0 | GCF_000188115.4;PRJNA66163;SAMN02981290;AEKE00000000.3;representative genome;4081;4081;Solanum lycopersicum;cultivar=Heinz 1706;;latest;Chromosome;Major;Full;2018/04/18;SL3.0;Solanaceae Genomics Project;GCA_000188115.3;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/115/GCF_000188115.4_SL3.0;;;na | 1 |
Links from other tables
- 126,368 rows from taxonomy_id in introns
- 25,615 rows from taxonomy_id in transcripts