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genomes: 3694

Data license: ODbL · Data source: Larue & Roy, 2023

This data as json

taxonomy_id species family order phylum accession n_minor_introns n_major_introns percent_minor_introns busco_score minor_snRNAs genome_version source_url source_metadata minor_intron+
3694 Populus trichocarpa Salicaceae Malpighiales Streptophyta GCF_000002775.4 402 161954 0.2476040306486979 99.6 ["u11", "u12", "u6atac"] Pop_tri_v3 https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/775/GCF_000002775.4_Pop_tri_v3 GCF_000002775.4;PRJNA17973;SAMN02953657;AARH00000000.3;representative genome;3694;3694;Populus trichocarpa;;Nisqually-1;latest;Chromosome;Major;Full;2018/01/24;Pop_tri_v3;US DOE Joint Genome Institute (JGI;GCA_000002775.3;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/775/GCF_000002775.4_Pop_tri_v3;;;na 1

Links from other tables

  • 162,356 rows from taxonomy_id in introns
  • 31,641 rows from taxonomy_id in transcripts
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