genomes: 3641
Data license: ODbL · Data source: Larue & Roy, 2023
This data as json
| taxonomy_id | species | family | order | phylum | accession | n_minor_introns | n_major_introns | percent_minor_introns | busco_score | minor_snRNAs | genome_version | source_url | source_metadata | minor_intron+ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3641 | Theobroma cacao | Malvaceae | Malvales | Streptophyta | GCF_000208745.1 | 276 | 110026 | 0.2502221174593389 | 99.6 | ["u11", "u12", "u6atac"] | Criollo_cocoa_genome_V2 | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/745/GCF_000208745.1_Criollo_cocoa_genome_V2 | GCF_000208745.1;PRJNA341501;SAMEA4028428;FLSQ00000000.1;representative genome;3641;3641;Theobroma cacao;cultivar=B97-61/B2;;latest;Chromosome;Major;Full;2016/07/09;Criollo_cocoa_genome_V2;CIRAD;GCA_000208745.2;different;https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/745/GCF_000208745.1_Criollo_cocoa_genome_V2;;;na | 1 |
Links from other tables
- 110,302 rows from taxonomy_id in introns
- 21,518 rows from taxonomy_id in transcripts