{"database": "WtMTA-db", "table": "genomes", "rows": [[9915, "Bos indicus", "zebu cattle", "vertebrates", "Chordata", "Artiodactyla", "Bovidae", "U12_POSITIVE", 702, 0.4312840106518467, 99.47, 745, 171995, "DETECTED", 348.3897534353251, 658, 44, "corroborated", "U11, U12, U4atac, U6atac", 4, 2.3e-26, 6.2e-37, 1.9e-21, 8.8e-33, 26229, 172740, 2673965444, 41.742, 53.384, 32, 106310653, 11, 93.8, "GCF_000247795.1", "Bos_indicus_1.0", "refseq", "https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000247795.1/", "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=9915", "https://en.wikipedia.org/wiki/Zebu", "species", "bos indicus;bos;bovinae;bovidae;pecora;ruminantia;artiodactyla;laurasiatheria;boreoeutheria;eutheria;theria;mammalia;amniota;tetrapoda;dipnotetrapodomorpha;sarcopterygii;euteleostomi;teleostomi;gnathostomata;vertebrata;craniata;chordata;deuterostomia;bilateria;eumetazoa;metazoa;opisthokonta;eukaryota;cellular organisms", "vertebrates/refseq/bos_indicus-Bos_indicus_1.0/bos_indicus.GCF_000247795.1_Bos_indicus_1.0_genomic.fna.gz", "vertebrates/refseq/bos_indicus-Bos_indicus_1.0/bos_indicus.GCF_000247795.1_Bos_indicus_1.0_genomic.gff.gz"]], "columns": ["taxonomy_id", "species", "common_name", "group", "phylum", "order", "family", "u12_status", "n_minor_introns", "percent_minor_introns", "u12_density_percentile", "n_u12_all", "n_major_introns", "motif_category", "z_excess", "hc_u12_cds", "hc_u12_exon", "snrna_status", "minor_snrnas", "n_minor_snrna", "u11_E", "u12_E", "u4atac_E", "u6atac_E", "total_genes", "total_introns_scored", "genome_size_bp", "gc_content", "coding_gc_content", "n_contigs", "assembly_n50", "assembly_l50", "busco_score", "accession", "genome_version", "source", "assembly_url", "ncbi_taxonomy_url", "wikipedia_url", "common_name_level", "taxonomy", "genome_path", "annotation_path"], "primary_keys": ["taxonomy_id"], "primary_key_values": ["9915"], "units": {}, "query_ms": 1.5046847984194756, "source": "Larue & Roy, 2023", "source_url": "https://doi.org/10.1101/2022.09.24.509304", "license": "ODbL", "license_url": "https://opendatacommons.org/licenses/odbl/"}